Organism and Environment Interactions into The Basic Theory of Community and Evolutionary Ecology

Organism and Environment Interactions into The Basic Theory of                                                 Community and Evolutionary Ecology


Abstract:

Understanding the interactions of an organism and its environment is essential for us to integrate ultimate and proximate causation on a global scale. Organism–environment interaction includes all organisms including animals, plants, and non-eukaryotes, etc. because all of them are responsive to environmental change including those that are human-induced. Implications for climate change in which weather extremes will become more common again suggest a mechanistic approach will be important to understand how organisms may respond. Organism–environment interaction is a fundamental concept that may unify ultimate and proximate causation and point the way for future investigations striving to understand coping mechanisms in a world where both predictable and unpredictable components of the environment are changing. Humans have dramatic, diverse and far-reaching influences on the evolution of other organisms. Numerous examples of this human-induced contemporary evolution have been reported in a number of ‘contexts’, including hunting, harvesting, fishing, agriculture, medicine, climate change, pollution, eutrophication, urbanization, habitat fragmentation, biological invasions and emerging  or disappearing diseases. Although numerous papers, journal special issues and books have addressed each of these contexts individually, the time has come to consider them together and thereby seek important similarities and differences. The goal of this special issue, and this introductory paper, is to promote and expand this nascent integration. We first develop predictions as to which human contexts might cause the strongest and most consistent directional selection, the greatest changes in evolutionary potential, the greatest genetic (as opposed to plastic) changes and the greatest effects on evolutionary diversification. We then develop predictions as to the contexts where human-induced evolutionary changes might have the strongest effect on the population dynamics of the focal evolving species, the structure of their communities, the functions of their ecosystems and the benefits and costs for human societies.These qualitative predictions are intended as a rallying point for broader and more detailed future discussions of how human influences shape evolution, and how that evolution then influences species traits, biodiversity, ecosystems and humans.

 

Keywords:

Stress, Seasonality, Human, eco-evolutionary, dynamics, contemporary evolution, anthropogenic influences, evolutionary diversification, rapid evolution, ecosystem services.

 

Introduction:

As described by Denny and Helmuth (Denny et al., 2009), integrating biomechanics and ecology represents a scaling up from the biomechanics of individual organisms and their interaction with their environment to the ecology of populations and communities. A full population biology understanding requires extension of biomechanics in two dimensions. In the ecological dimension, scaling up from populations to interacting species provides a community- and ecosystem-level understanding rooted in mechanistic knowledge. In the temporal dimension, scaling up from ecological to evolutionary time provides an evolutionary understanding also rooted in mechanistic knowledge of organisms’ interactions with their environment.

 

Much of the basic theory of population biology focuses on the generality side of this trade-off, where the goal might be to formalize a hypothesis about the factors driving a given outcome in a mathematical framework to rigorously test and quantify the underlying logical expectations (i.e. mathematics as ‘a way of thinking clearly’) (May, 2004). In contrast, biomechanics, including that integrated with ecology, is rooted in a bottom-up approach focusing on detailed mechanisms (Denny et al., 2009) and therefore gravitates towards the realism side of this trade off. A number of modeling frameworks, described elsewhere in this special issue of The Journal of Experimental Biology, follow the biomechanics approach of scaling up from mechanistic physiological [e.g. dynamic energy budget models (Nisbet et al., 2012)] or individual-level (e.g. scale-transition and complexity theory (Benedetti-Cecchi et al., 2012; Van de Koppel et al., 2012) dynamics to patterns on ecological scales.

 

This functional response-based approach can apply to additional modeling frameworks from basic theoretical population biology not covered here such as non-evolutionary single-population dynamics, including stage- or physiologically structured dynamics. Also, scaling up in space receives only superficial attention here. The focus here on community and evolutionary ecology is intended to provide an illustration of the general approach centered on the scaling up of biomechanics ecologically and temporally. In addition, it complements the population models presented elsewhere in this special issue, such as the structured population models of Nisbet et al. and Madin and Connolly (Nisbet et al., 2012; Madin and Connolly, 2012) as well as the models focused on scaling up community dynamics in space discussed by Benedetti- Cecchi et al. and Van de Koppel et al. (Benedetti-Cecchi et al., 2012; Van de Koppel et al., 2012).

 

The science which deals with the study of the biota, their environment and interactions is known as Ecology. Ecology derived from the Greek word Oikos meaning habitation, and logos meaning study, i.e., study of the habitations of organisms (Figure 1). This is the study of ecosystem, which describe the relation between the organisms with different habitats. The environment of an organism includes both biotic and abiotic factors. These two factors have to coordinate each other to share the resources that are present within the environmental ecosystem. To understand about this mutual relationship we have to study ecology. Human being is also the part of ecosystem.





Fig. 1: Components of environment.

Types of Ecology:

The ecological studies are all about connections of all life forms in earth and their various types of ecology (Figure 2). Organism Ecology This is the study of organism respond to stimuli caused by physical environment. The organisms adapt the environment either happily or ignoring away from its effect. A physical change in environment will show the change in behaviour or physical attributes.

 

(i) Population Ecology: The natural process is that, all organisms will grow and die. The factors by which they will populate are the size of colony, birth and death rate, population growth rate.

 

(ii) Community Ecology:  The association of populations of two or more different species occupying the same geographical area. Competition, mutualisms are key interactions to maintaining a community.

(iii) Ecosystem Ecology: This is the community of living organisms along with non-living environment like air, water, soil.

 

(iv) Landscape Ecology: The exchange of energy, materials, organisms and other products between the ecosystems is known as landscape ecology.

 

(v) Global Ecology: The effect of change in energy and matter exchange on the function and distribution of organism in environment.



Fig.2:  Hierarchical organization of ecology.

 

Types of environment:

The term environment describes the sum total of physical, chemical and biotic conditions surrounding and influencing the living organisms. Environment is classified into three types-

 

(i) Biotic (Biological):

Biotic elements refer to the biological component of the ecosystem, having the population of plants, animals and microorganisms. The biotic component of the ecosystem consists of 3 groups of organisms, the producers, consumers and decomposers. The producers are the organisms those are capable for photosynthesis (plants). The consumers depend on the producers (all herbivores).  The decomposers are the organisms that are rely on dead organisms for their existence (bacteria, virus, and yeast).

 

(ii) Abiotic (Physical):

It includes the flow of energy necessary to maintain any organism, the physical factor(climate, temperature, rain, snow, hills) that affects it and the supply of molecules required for its life functions(carbon, hydrogen, nitrogen, sulphur, phosphorus). Cultural The interaction between human and environment also influence the ecosystem. Background of different cultures put different values on natural world.

 

 

 


Importance of studying Ecology:

 (i) Environmental Conversation

By studying ecology, the emphasis is put on how every organism needs other for peaceful coexistence. Having no ideas on ecology will responsible for degradation of land and environment, which is the living place of other species leading to their destruction.

 

(ii) Resource Allocation

All plants and animals have roles in the environment as they sharing limited natural resources such as air, minerals, space. Lack of ecological studies may be the cause of deprivation and looting of these natural resources.

 

(iii) Energy Conservation

The entire living organism needs energy such as nutrition, light, radiation etc. So lack of ecological studies will be the cause for destruction of the energy resources. Oil, coal, and natural gases are the non-renewable sources which will destruct the ozone layer.

 

(iv) Eco-friendliness

It helps to appreciate living among the organisms; this will follow natural order of things.

 

Evolutionary ecology

In the community models described above, mechanistic knowledge about organisms’ interactions with their environment could factor into an environment-dependent functional response for a variety of dynamics, from intraspecific dynamics such as population growth rate to interaction dynamics such as predation rate. For a single species model of evolutionary change, it is the mechanistic functional response in terms of the environment-dependent population growth rate (i.e. function that describes how the population growth rate responds to the environment) that holds particular relevance as it provides a metric of fitness. If this function appropriately describes both population growth and fitness, then it can serve to couple ecological and evolutionary dynamics. Below, I describe two broad frameworks for integrating such a mechanistic functional response into evolutionary dynamics: quantitative genetics (with two modeling approaches described) and game theory. This is not intended to be an exhaustive accounting of all models relevant to these frameworks but rather an example illustration of a handful of commonly used models. The focus here is on the micro-evolutionary dynamics of changing gene frequencies within a population rather than the macro-evolutionary processes of speciation and extinction because microevolution has greater ecological relevance and is therefore more relevant to this special issue. In addition, for simplicity, this section focuses on single-species models; for an integrative review of both population genetic and game theoretic frameworks in the context of coevolutionary questions of evolutionary ecology (Abrams, 2001) and Day (Day, 2005).

 

In addition to describing the generic mathematical formulations with an indication of which term can be an environment-dependent functional response in all cases, for the first quantitative genetics modeling approach we discuss existing theoretical constructs (specifically, phenotype performance fitness framework and function-valued traits) that are particularly relevant to the integration of biomechanics. For the second quantitative genetics modelling approach we analyze an example based on the evolution of thermal tolerance in a changing environment in order to illustrate the mechanistic functional response approach. Finally, for the game theory approach we use a discussion of dispersal, a topic often explored in both game theory and biomechanics, to exemplify how a biomechanics-based understanding might shift the focus of evolutionary models and allow better integration of models with data.

 

Quantitative Genetics:

Population genetic models follow gene frequencies over time as they depend on relative fitness, which encompasses both survivorship and reproductive success. While the simplest possible model construction of density-independent fitness leads to genetic dynamics independent of population dynamics (i.e. gene frequency dynamics do not depend on population size), the average population fitness (relative frequency of each genotype multiplied by its fitness, then summed over all possible genotypes) could be considered a metric of the population growth rate, thus coupling the population (ecological) dynamics to the genetic (evolutionary) dynamics. In addition, consideration of density-dependent influences on fitness inevitably leads to population size-dependent genotype fitness and therefore necessitates fully coupled population and genetic dynamics (Day, 2005).

 

Conservation applications:

Both ecological and evolutionary processes occur in the context of human-driven global change (Palumbi, 2001). One proposed strength of a more mechanistic approach to ecological and evolutionary modeling, especially that related to biomechanics, is the enhanced predictive power under novel environmental conditions, such as physiological understanding informing predicted responses to climate change (Helmuth et al., 2005; Denny et al., 2009; Hofmann et al., 2010;  Hoffmann et al., 2011). However, the types of models described here, even with added realism from mechanistic functional responses, remain at the general end of the modeling trade-off described in the Introduction and therefore tend not to have the level of both realism and precision necessary for predictions (Levins, 1966). In addition, the key challenge for ecologists and conservation biologists is not just predicting what will happen under climate change, but informing local science-based management decisions (e.g. reserve design, invasive species control) under a changing climate (Dawson et al., 2011; Heller et al., 2009). Vulnerability estimated from predictive models can provide a first step towards conservation management under a changing climate (Rowland et al., 2011), but insight into relative vulnerability and sensitivity to different processes can stem from the more general models described here as well.

 

One possible component of local management under climate change is to protect the capacity of natural systems to respond to the global changes (Heller et al., 2009). On the evolutionary level, protecting response capacity means protecting the potential for genetic adaptation as it depends on properties such as genetic variance, population size and the level of gene flow (Hoffmann et al., 2011) where genetic adaptation is one aspect of the population-level response to climate change, along with movement and acclimation (Parmesan, 2006). On the community level, protecting the response capacity involves protecting community-level resistance, resilience and robustness to environmental change as it depends on properties and processes such as diversity, modularity, redundancy and feedback loops (Levin et al., 2008).Sensitivity of basic models to different assumptions and parameters can provide insight into which processes and properties are most important to the overall response and therefore inform this aspect of management under climate change.

 

Conservation management efforts [e.g. Crouse and colleagues] (Crouse et al., 1987) provide a quintessential example of this approach. For an example related to the question of physiological response to climate change, we constructed a model, rooted in the thermal tolerance fitness function described above, of coral reef ecological and evolutionary response to the future thermal stress expected with climate change (Baskett et al., 2010). Sensitivity analysis of a variety of model constructs and of all model parameters provided an integrative and quantitative comparison of existing recommendations (previously considered qualitatively and occasionally contradictory) for local protection of coral reef resistance, resilience and adaptive capacity in a changing climate. Generally, incorporating mechanistic functional responses into basic models allows greater connection of model parameters to biologically relevant characteristics (Schoener, 1986), and therefore increases the potential to connect model outcomes to an empirical understanding of important traits or physiological processes. Furthermore, mechanistic functional responses that include interactions with the physical environment will also indicate sensitivity to empirically relevant environmental conditions. Such insights can provide a sense both of which patterns or processes might best allow response capacity and of which local stressors are more likely to interact synergistically with global change, which can suggest prioritization in terms of which locations and processes to protect and which local stressors to protect against. This enhanced realism and biological relevance in the context of basic models could help add much-needed specificity to general recommendations, allowing them to strike the difficult-to-achieve balance between broad applicability and concreteness for recommendations for management under a changing climate (Heller et al., 2009).

 

Governance Considerations:

The equilibrating processes that buffer the effects of the burgeoning human population density are extracted from a diminishing area of global natural environments that supply the air we breathe, the seafood we consume, and the land we cultivate. Many of these environments provide resources that are shared by multiple governing states and have influences beyond country boundaries. Perhaps the greatest barrier to protecting these environmental systems is the temptation of states or other stakeholders to contribute to a “tragedy of the commons,” wherein a common resource is overexploited because stakeholders with unfettered access have an incentive to exploit the resource as quickly as possible before the other stakeholders do the same (Bull et al., 2016; Cairns et al., 2017). Guarding against exploitation requires a system of governance, whether collectively imposed by the stakeholders or externally imposed (Bull et al., 2016; Cairns et al., 2017). Common pool resource problems necessitate considering strategic interactions in a group, as can be formalized and analyzed using game theory. Using game theory, Barrett (Barrett et al., 2016) outlines three forms of international law that can be used to circumvent environmental degradation: (i) treaties that implore states to act in a collective interest; (ii) treaties that impel cooperating states to punish the uncooperative; and (iii) treaties that coordinate the behaviour of states. Noting the failures of the first two forms, Barrett applies game theory to demonstrate elegantly the potential for “coordination games” to ensure cooperative protection of our shared global environment. Barrett details how effective cooperation can be facilitated both by international policy that coordinates all governing parties to realize mutual gains, and by trade agreements or technical standards formulated such that all parties can coordinate in their own interest to realize mutual gains. The failure of international treaties with weak accountability is highlighted by Mangel (Mangel et al., 2016) in the specific context of whaling. Simultaneously, Mangel underscores the complexity of enforcement, which entails a role for evidence-based scientific expertise at the interface of law and species preservation. Similarly, Castro et al., 2016 call for engagement of the academic community at the corporate interface to assess objectively the complex impacts of the industrial activities. Analogous to the conflict between governing states over shared resources highlighted by Barrett (Barrett et al., 2016), conflicts similarly arise between corporations and communities, as illuminated by Castro et al. with case studies from extractive industries and hydropower development. Castro et al. (Castro et al., 2016) also highlight a particularly vexing long-standing issue: the problem of obtaining unbiased environmental, social, and health impact assessments for corporate projects where the results of the assessments influence decisions on whether or not a project is to move forward. Furthermore, follow-up impact assessments, confirming or overriding the impact predictions, are also needed to form a basis for corporate accountability once project implementation is underway. An important and balanced framework for this process comes from an unexpected source: the Roman Catholic Church in several sections of the Papal Encyclical (Chapin, 2003; Brulle  et al., 2015; Castro et al, 2016; Cheptou et al., 2017; Colautti et al, 2017) “Laudato Si,” recently issued by Pope Francis. Operationalization of the segment of the encyclical devoted to “Environmental Impact Assessment” is a major challenge, where success could have profound positive impact on human–environmental interactions. Among natural resources that are shared among states, ocean ecosystems are one of the most prominent. The essential roles that ocean ecosystems play in food security, economic development, and climatic processes led the United Nations Sustainable Development Goals to include the conservation of marine reserves as an explicit priority for their most recent agenda. Hurdles to this conservation include overfishing, climate change, and population growth, all of which are captured and addressed by the complex adaptive-systems framework advanced by Lubchenco et al., 2016, which demonstrates how complexity can be navigated to generate thoughtful incentive structures that align conservation and economic benefits. Lubchenco et al.’s framework can motivate positive shifts in behavior at the individual, corporate, or national level, as illustrated by recent progress toward fishery restoration. In a contrasting example of unsuccessful incentive structures, Walsh et al., 2016 examine how policies surrounding ecotourism within the iconic haven of the Galapagos have been heavily weighted toward supporting the growth of tourism, benefiting the local economy at the expense of environmental decay. Reforming incentive structures simultaneously to promote human well-being and alleviate inequalities across and within nations, both in the near and longer-term, has the potential to resolve the conflicts described in the Galapagos by Walsh et al., 2016, in the extractive industries by Castro et al., 2016, and in Japanese whaling practices by Mangel (Mangel et al., 2016).

 

Monitoring and Modeling Human:

Environment Feedbacks for Ecological Resources One of the greatest challenges facing humans is how to feed our growing population while sustaining what remains of biodiversity and ecosystem services. Conversion of natural areas to agricultural use is the leading cause of forest loss globally. Natural grassland areas are under even greater threat (Pagnutti et al., 2013). Two papers in this issue examine the power of applying new monitoring tools and modelling approaches to conserve biodiversity in agriculturally dominated ecosystems. Mendenhall et al., 2016 assess a region in Costa Rica across which nearly 50% of forest cover is embedded in rural agricultural land. The preservation of forest thus requires that diverse farming systems that preserve biodiversity be highly valued by the landowners. To determine the ecological value of arboreal and agricultural coexistence, Mendenhall et al. develop models that quantify the relationships between local tree cover and biodiversity. They stress the importance of compensating farmers for the ecosystem services provided by their lands, another example where the architecture of incentives is crucial to the sustenance of ecosystem health and viability in coupled human–environment systems. Similarly, Henderson et al. (Henderson et al., 2016) examine a region in southern Brazil where natural mosaics of forests interspersed with grasslands are gradually converted to agricultural and silvicultural use. The authors study long-term trajectories of these mosaics by coupling the ecological dynamics to a model of human behavior, calibrated with ecological and sociological data. Henderson et al. (2016) show that the sustainability of forest–grassland–agriculture mosaics depends on a comprehensive valuation of land-use types that includes both economic and ecological dimensions, a theme that is underscored by a number of papers in this series. Technological innovations promise transformation of our lives and economies, but innovations can concurrently destabilize our natural environment. As just one example, hydraulic fracking facilitates the extraction of otherwise inaccessible fossil fuel and has been credited with catalyzing the economies of a number of US states following financial crises. Nevertheless, the staggering costs of air pollution, drinking water contamination, and global warming exacerbation are unacceptable. Sustainable environmental equilibria can be subject to sudden and catastrophic regime shifts that could arise from technological innovations that accelerate the rate at which resources can be extracted. The detection of early warning signals is a vital component of adaptation strategies that mitigate environmental disruption. Bauch et al., (2016) demonstrate that coupled human–environment systems can also exhibit the same types of early warning signals that occur in uncoupled ecological systems. Important differences arise, however. For example, early warning signals could herald shifts toward either collapse or conservation regimes, depending on parameter values. Moreover, human vacillation between complacency and concern in response to perceived resource availability can threaten the viability of long-term conservation and keep the human–environment system perpetually in the vicinity of a dangerous tipping point. This danger underscores the need for long-term thinking to replace reactionary behavior. Hastings et al., (2016) emphasizes the importance of considering short- and long-term temporal dynamics, including time delays and tipping points that arise from population demography, in the recovery of ecological systems under alternative management practices. The time scale pertinent to optimizing outcomes of management and sustainability is highly dependent upon the specific ecological system in question. Hastings provides a broadly applicable optimization approach that addresses the issue of time scale for environmental management, ranging from invasive species to fisheries.

 

Human–Environmental Health:

The field of epidemiology is rooted in ecological theory. The principles of species conservation are fundamental to infectious disease epidemiology, except the goal is reversed: we aim to push a pathogen species to extinction. The increasingly mobile and dense human population represents a continuously expanding niche for infectious diseases. Similarly, agricultural, and domestic animal species have increased alongside humans, whereas most other species have declined. To an impressive extent, we have been able to keep pace with pathogen emergence and spread by virtue of our ingenuity, underlying the development of vaccines and therapeutics. Nonetheless, pharma-ceutical innovations are only as effective as the degree to which humans are able and willing to adhere to the recommended implementation. Vaccine refusal has plagued the control of childhood disease and eradication efforts against polio (Bauch et al., 2013). Also critical is population adherence to non-pharmaceutical interventions, such as animal movement bans during the United Kingdom foot-and-mouth outbreak and avoidance of the culturally important traditional burials during the West African Ebola outbreak. Frameworks, such as the one developed by Lubchenco et al., (2016) to facilitate the alignment of otherwise opposing interests and enhance synergies between disparate entities in fisheries, are equally important to the arena of public health. The unifying One Health paradigm incorporates the human species as a component in an interdependent health ecosystem, where we can both affect and be affected by changes in the environment and in zoonotic communities. Within our lifetimes, we have seen HIV and Ebola jump from primates to humans, as well as antimicrobial resistance spread in response to our livestock care practices. Beyond these high-profile recent examples, many of history’s greatest scourges originated via zoonosis, including rabies, leprosy, and the bubonic plague. The One Health movement seeks to make the human connection to other species an explicit part of analysis and planning. In support of this paradigm, governmental agencies and academic organizations have devised a variety of ways for uniting expertise across traditionally separate fields, usually by economic quantification of projected costs and benefits. For example, the Indian state of Tamil Nadu has pioneered the establishment of a state-level One Health coordination committee. This committee brings together leaders from the human health, veterinary, and animal welfare sectors to develop rabies control strategies that transcend sectoral boundaries. To inform cooperative resource allocation and decision making, Fitzpatrick et al., (2016) were commissioned to evaluate the various strategies under consideration by this committee, quantifying the impact of veterinary sector efforts on human health. In comparison with economic analyses of rabies campaigns in sub- Saharan Africa, the vaccination coverage found to be effective and efficient for Tamil Nadu was also highly feasible to implement, even more so than rabies control strategies advocated by the World Health Organization and implemented in other countries. The case study of rabies control in Tamil Nadu demonstrates the value of even modest investments in zoonotic disease prevention, and highlights the importance of tailoring infectious disease control policies to specific settings. At the same time, Fitzpatrick et al.’s framework (2016) for the evaluation of the effectiveness and cost-effectiveness of One Health strategies is applicable to other multi sectoral solutions to address public health and environmental challenges.

 

A controversial ethical issue underlying cost-effectiveness analysis specifically, and resource allocation trade-offs between different points in time generally, is the rate of discounting the future that should be applied to integrate both costs and values over time, given both uncertainty about future events and the opportunity costs from forgoing alternative investments. For considerations of health economics, the World Health Organization stipulates that a 3% annual discounting rate should be applied (Dibattista et al, 2008). This has become the standard in cost-effectiveness. However, compounding of the 3% discounting every year leads to diminishingly small valuation for the future beyond a couple of decades. This low valuation stands in contrast to the degree of concern that most people feel for the future that their children and their children’s children will experience. It has been argued that for environmental considerations, the discounting rate that is ethical to future generations should be extremely low, to properly treat the interests of future generations (Roemer et al.,2010).

 

Economic discounting is partly motivated by the uncertainty of what the future holds. Mechanistic and statistical models are often developed with the goal of predicting future trends in human– environment systems. The focus of several papers in this issue was predictive modeling, particularly how the interrelated dynamics of disease transmission and human behavior influence the ecology, evolution, and control of infectious diseases (Bauch et al., 2013) across spatial, temporal, and organizational scales. Using a model of intrapatch disease spread and interpatch mobility, Castillo-Chavez et al. (Castillo et al., 2016) illustrate the limitations of existing theoretical frameworks with respect to modeling such complex adaptive systems. The authors call for the formulation of improved theoretical frameworks that can encompass such processes and disentangle the role of epidemiological and socio-economic forces. Although there is overwhelming evidence for anthropogenic climate change, the multilayered repercussions on physical and biological systems are likely so extensive that they are still being realized. As an example of this concern, Fisman et al., (2016) identify externalities of climate change on disease trends in the United States that have previously gone unappreciated. Specifically, their analysis of temporal trends of hospitalization data reveals that vector-borne and enteric disease in the United States are impacted by climatic shifts associated with El Ni~no Southern Oscillations. Given that this relationship between climate change and vectorborne, as well as enteric diseases, is significant even in a country with high levels of sanitation and relatively low prevalence of these diseases, the influence of climate change on such diseases are expected to be even greater in developing countries. Becker et al., (2016) point out that modeling-coupled human–environment interactions requires understanding how natural system dynamics unfold at both small and large spatial scales, such as individual house-holds versus entire cities. Applying a stochastic disease transmission model to a 1904 measles outbreak in London, as well as to the 2014–2015 Disneyland, California measles outbreak, Becker et al. find that disease transmission within schools and within age classes is higher than has been estimated from population-level serological analyses. Population dynamics not only vary at different spatial scales, as in Becker et al. (Becker et al., 2016), and at different time scales, as in Hastings (Hastings et al., 2016), but can also be affected by rapid evolutionary processes. Lewnard and Townsend (Lewnard et al., 2016) demonstrate that the evolution of disease resistance in a disease vector can drive shifts in outbreak seasonality. To capture these complex interactions, they analyze extensive data from the Indian Plague Commission on climate, rat infection and resistance, and survival of flea vectors at different temperatures. Integrating this data into a model that combines environmentally forced plague dynamics with selection for a quantitative resistance trait in rats, Lewnard and Townsend demonstrate that the observed phase shifts in epidemic dynamics were modulated by the evolution of resistance over time. Moreover, incorporating the evolution of plague resistance among rats into their model reproduces observed changes in seasonal epidemic patterns. Furthermore, it captures experimentally observed associations between climate and flea population dynamics in India. Similar to Becker et al., (2016), Lewnard and Townsend (Lewnard et al., 2016) demonstrate that historical datasets can yield insights into the epidemiological, ecological, and evolutionary dynamics of re-emerging disease agents, insights that will help to guide the design of preparedness and response strategies that mitigate future outbreaks.

 

The Need for Cooperation in Protecting Human:

Environment Systems Fragile ecosystems are subject not only to conflicts between short term rewards and long-term conservation goals, but also are subject to the vagary of human responses to environmental challenges. Given that many environmental problem- including those explored in this issue- represent a common pool resource problem, their solution will require improved cooperation between humans. The human mind has spent most of its evolutionary history in a hunter-gatherer setting, and it is in this localized setting that our penchant for cooperation evolved. Consequently, a pressing challenge for the current phase in the evolutionary journey of our species is to promote the scale-up of cooperation far beyond localized settings. Cross-sectoral, collaborative, and integrated approaches can be powerful tools to bolstering the sustainability, resiliency, and equitability of natural resources within and between generations globally. Public health, conservation, agricultural security, and economic development are deeply intertwined in ways that are not immediately obvious. Understanding the interplay is fundamental to the development of an architecture of incentives and rewards that aligns disparate interests to optimize outcomes over the long-term. In the precarious balance between improving the standard of living across the globe while minimizing the negative externalities associated with the resources that we extract to do so, it is imperative to identify synergies that make effective solutions cost-effective as well. The human species has unparalleled capacities of ingenuity, foresight, and compassion that can be used to direct the current trajectory of the world’s ecosystems from rapid deterioration and destabilization toward equity and sustainability.

 

Human influences on evolution:

(a) In which contexts will directional selection be the strongest and most consistent?

 

(b)Directional selection favouring evolutionary change is expected to be the strongest and most consistent when population phenotypes rest persistently on the slopes of steep adaptive peaks (Fig. 1). This state can arise when the elevations and gradients of peaks are the greatest, and when their displacement from current phenotypes is the farthest, fastest and most sustained. One confluence of these conditions occurs when selection consistently favours the most extreme trait values (e.g. the largest body sizes) independent of the specific distribution of trait values. Another confluence occurs in antagonistic coevolution, where the evolution of one species (e.g. a parasite) to better exploit another species (e.g. a host) leads to the evolution of countermeasures and, hence, the continual evolution of both species (Brockhurst et al., 2014; Carmona et al., 2015). These co-evolutionary arms races come in two general forms: escalating arms races (Nuismer et al., 2007) and cyclical Red Queen dynamics. Both forms of antagonistic coevolution can impose strong directional selection, but escalating arms races might more often lead to consistent directional change.

 

 

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 Fig 4 . Graphical representation of  eco-evolutionary dynamics interact with human influences

 


Strong and consistent directional selection might arise in any of the human disturbance contexts, but we specifically wish to highlight hunting or harvesting,   climate   change and certain agricul-tural and human health situations. For hunting or harvesting, selection can actively target and disproportionately remove the largest individuals each generation, regardless of average body size (Kuparinen et al., 2017). Strong directional selection for smaller size thus should persist even as evolution proceeds. Matching this expectation, phenotypic changes in wild populations are greatest when humans act as predators (Bull et al., 2016, Darimont et al., 2009) and when fishing intensity is strongest (Sharpe et al., 2009). For climate change, one might similarly assume that, because warming is ongoing, optimal trait values should continue to shift in the same direction, with a clear example being the advancement of spring phenology (Lancaster et al., 2017, Parmesan et al., 2003). However, year-to-year climate vari- ation can exceed the overall warming trend, and so selection should be variable from year to year (Yang et al., 2010). Of course, directional selection will not be eternal in either context, because harvesting often ceases when fish get too small or rare, and because phenology cannot advance indefinitely. Hence, we instead expect the strongest and most consistent directional selection to arise when humans instigate or intensify escalating arms races, such as when we kill or control our enemies (weeds, pests, pathogens), which then evolve resistance, which thus necessi- tates newer or stronger control measures and so on (Turcotte et al., 2017, Hiltunen et al., 2017, Rogalski et al., 2017). Even here, directional selection might stop or at least weaken if, for example, enemies evolve tolerance instead of resistance (Langwig et al., 2017, Svensson et al., 2010) if they evolve to become friends or neigh- bours (e.g. domestication of wild animals or plants), or if we wipe them out.

 

In which contexts will evolutionary potential be the most dramatically altered?

Evolutionary potential is determined by the distribution of genetic (co)variance across the adaptive landscape, with greater variance and better alignment with the direction of selection both expected to speed evolution (Wood et al., 2016). Any perturbation that alters genetic (co)variance can thus influence evolutionary dynamics on a given adaptive landscape. In some cases, genetic variation can increase, including through greater gene flow, hybridization or mutation. Such increases can be beneficial if enough of the new variation is adaptive versus detrimental if too much of it is maladaptive. In other cases, genetic variation can decrease, most obviously through strong selection or reduced population size (which might or might not be coupled), with the latter increasing gen- etic drift and inbreeding. Such decreases could be beneficial (e.g. if they reflect precise adaptation) or detrimental (e.g. if they limit future responses to selection).

 

We suggest that the greatest increases in genetic variation will attend contexts where population sizes increase most dramatically, such as for introduced species experiencing ‘enemy release’ (Colautti et al., 2017) and for native species benefiting from ‘disappearing diseases’ (Rogalski et al., 2017). Increases are also expected when diverse source populations are brought together in new locations (Colautti et al., 2017, Roy et al., 2015) and in the case of exposure to mutagens (e.g. pollution (Moller et al., 2015). We suggest that the greatest decreases in genetic variation will attend contexts where selection is strong and consistent, and/or when population sizes decrease dramatically. Some contexts that generate strong selection were discussed earlier, especially hunting/harvesting and some coevolutionary arms races. However, even exceptionally strong selection does not always deplete relevant genetic variation, especially when the selection is variable in time and space. Some contexts that can greatly reduce population size include habitat loss (e.g. urbanization (Cheptou et al., 2017), strong abiotic stressors (e.g. pollution (Hamilton et al., 2017, Alexander et al., 2017) and strong biotic stres- sors (e.g. invasive predators/parasites (Colautti et al., 2017) and emerging diseases. Additionally, genetic variation within populations can decrease owing to fragmentation that reduces gene flow.

 

In which contexts will evolutionary diversification be most altered?

Biodiversity evolves through adaptation to (i) different environments (i.e.  different peaks  on  an  adaptive  landscape) and (ii) similar environments in different locations (i.e. the same peak on different adaptive landscapes). Thus, human influences that change the number, type and distinctiveness of environments and locations will effectively change the number, position and shape of adaptive peaks, which will thereby influence the evolution of biodiversity (Fig.1)These effects could arise in three basic ways. First, humans can change how populations in different locations experience divergent selection by, for example, translocating species into new locations (Herrel et al., 2008) or altering habitats in some locations (Dibattista et al., 2011, Salmo et al., 2016). Second, humans can modify the number and distinc- tiveness of alternative environments in a given location, thereby altering disruptive selection. Third, humans can modify the evolutionary independence of populations and species by altering hybridization, gene flow and introgression (Seehausen et al., 2008). In each case, the effects can be ‘positive’ by facilitating the evolution of increased biodiversity (reviewed in (Hendry et al., 2007) or ‘negative’ by causing the evolution of decreased biodiversity (Seehausen et al., 2008). Each of the contexts for human influence could have the above ramifications; yet they seem particularly to converge for species introductions that lead to biological invasions. Specifically, introduced species often experience novel selective pressures, especially new biotic interactions, and have considerable evolutionary independence from source populations in the native range. In addition, introduced species can provide new ‘environments’ for adaptation by native species, with an exemplar being new insect host races - and their associated species - on introduced plants (Forbes et al., 2009). Alternatively, or additionally, species introductions can cause the evolution of decreased biodiversity by altering the distinctiveness of natural environments, with an exemplar being new food types for birds that diminish the distinctiveness of native food types. Introductions can also increase or decrease biodiversity by altering patterns of gene flow, hybrid- ization and gene flow within and among species (Vonlanthen et al., 2012). Other contexts that merit special mention are fragmentation, which imposes strong selection and increases evolutionary independence (Cheptou et al., 2017), and urbanization and pollution, which create especially novel environments (Hamilton et al., 2017, Alberti et al.,2017 , Alberti et al., 2014).

 

Ecological and societal consequences:

(i) In which contexts will human-induced evolution most alter population dynamics?

Humans have direct effects on species that alter aspects of their population structure ranging from age distributions to overall abundance. Beyond these direct demographic effects, humans can indirectly modify species’ population dynamics by influencing their evolution. For instance, environmental change should render many populations maladapted, leading to decreased individual fitness, which should decrease population size potentially causing extirpation or extinction. Yet this mal-adaptation should also generate selection, which should promote adaptation that increases individual fitness, which should increase population size potentially allowing ‘evolutionary rescue’ (Carls on et al.,2014; Gonzalez et al., 2013). However, these potential evolutionary benefits are not inevitable, nor are they necessarily sufficient for recovery. First, evolutionary rescue depends on sufficient adaptive genetic variation, which might or might not be present. Second, strong selection can impose a mortality cost (i.e. ‘hard’ selection) that dramatically reduces population size, which can decrease genetic variation and increase inbreeding, drift and stochastic extinction (Saccheri et al., 2006). As an additional effect, human activities can lead to the evolution of increased (or decreased) carrying capacity in particular species, such as through adaptation to new environments or resources.

 

Evolution occurring in any of the contexts for human influence could alter species’ population dynamics, with several effects being especially clear. First, the negative effects of pollution (e.g. toxic chemicals) should often impose hard selection that can influence population size (Lotze et al., 2004). Second, attempts to reduce or eliminate enemies in agriculture and medicine are specifically designed to decrease the target’s absolute fitness and should therefore also impose hard selection. With respect to the evolution of carrying capacity, several other human activities seem likely to be particularly potent. For instance, humans often generate novel environments (e.g. urbanization (Cheptou et al., 2017) and agriculture (Turcotte et al., 2017) and novel species interactions (e.g. invasions/extinctions and emerging/disappearing diseases (Rogalski et al., 2017) that can provide opportunities for evolutionary niche expansion. Putative examples might be mosquitoes adapting to the London Underground and again new insect host races on introduced plants (Forbes et al., 2009). In all of these scenarios and others the evolution caused by human activities can substantially alter the abundance, age structure and population growth rate.

 

(b) In which contexts will human-induced evolution most alter community structure?

As was the case for population dynamics, humans often have direct demographic influences on community structure, whereas we are here interested in the evolutionary effects. We distinguish two main scenarios. First, human activities can have broad effects that simultaneously influence the evolution of manyspecies, thus providing multiple points of entry for influence on a given community. Second, human activities can have strong effects on the evolution of particular ‘important’ species, which can then have cascading effects on the broader community (Cairns et al., 2017). These cascading effects could be a direct result of trait change in the important species; that is, trait- mediated effects of an evolving species on the community in which it is embedded. Alternatively or additionally, the evolution of an important species could alter its population dynamics, which could thereby influence the rest of the community.

 

Simultaneous multispecies evolutionary effects seem possible in many contexts, but especially so for wholesale alterations of the environment. One such context is climate change, which is reshaping the phenology (and other traits) of large sets of interacting species, which thereby alters relative species abundances and the structure of food webs (Both et al., 2009). Wholesale environmental alterations are also typical in urbanization, fragmentation, pollution and agriculture (Laurance et al., 2014). Cascading effects of an important species seem most likely when humans influence the evolution of particular ‘keystone’ species, ‘foundation’ species, ‘niche constructing’ species, ‘ecosystem engineers’, ‘strong interactors’ and so on. These important species could be those having very large effects as individuals (e.g. beavers, elephants and sea otters) or large effects owing to their high abundance (e.g. weeds, pests, pathogens and migratory species). We suggest that the community consequences of evolution in important species such as these are particularly likely for hunting/harvesting and human health, where humans often directly target specific large-effect friends or enemies. The same should be true when climate change or the bioaccumulation of toxins influences the evolution of apex predators (Zarnetske et al., 2012).

 

(c) In which contexts will human-induced evolution most alter ecosystem function?

Human influences on evolution that then have consequences for the dynamics of populations and species and the structure of communities might thereby alter various aspects of ecosystem function, such as primary productivity, nutrient cycling, decomposition rates and carbon sequestration (Bailey et al., 2009). In parallel to our above suggestions for community structure, these effects could arise through wholesale environmental manipulations that influence the evolution of many species, or through effects on the evolution of specific important species, which could then have trait- or density- mediated effects on ecosystems. Additionally, the evolutionary effects on community structure considered in the previous question could cascade to have ecosystem consequences. Finally, any evolutionary influences on a particular ecosystem function could have cascading influences on other ecosystem functions, including through feedbacks that influence community structure, population dynamics and trait evolution.

 

The most important contexts for human-caused evolutionary effects on ecosystem function might be similar to those described above for community structure. First, wholesale environmental change that causes the evolution of many species that together have important ecosystem effects seems particularly likely for climate change, urbanization, pollution and agriculture. Second, cascading effects of the evolution of important species seem particularly likely for hunting/harvesting, agriculture and human health. Although evolutionary effects on ecosystem function could be strong (e.g. for plant size affecting nutrient and carbon cycling (Chapin et al., 2003), theory and empirical assessments have suggested that such effects might be weaker at the ecosystem level than at the community level. The hypothesized reason is that additional external variables are expected to strongly influence ecosystem processes, and thereby swamp, or at least obscure, the effects of contemporary evolution. As examples, potential ecosystem effects of evolution might be swamped for climate change by the direct abiotic effects of varying temperature and precipitation, for agriculture by the direct effects of fertilizer and irrigation and for eutrophication by the direct effects of nutrients. Thus, we might expect the effects of evolution on ecosystems to be strongest, or at least the most obvious, in contexts where external drivers are not changing dramatically at the same time. Two such contexts might be introduced/invasive species and hunting/harvesting, where changes in biotic conditions could be more important than changes in abiotic factors. Of course, it is also possible for altered biotic interactions to swamp or obscure underlying eco-evolutionary dynamics.

 

(d) In which contexts will human-induced evolution most alter human societies?

We have thus far addressed how human influences on evolution can alter ecological processes at the population, community and ecosystem levels. It is now time to evaluate when these effects might have the greatest consequences for humans themselves, with respect either to services (from our friends) or disservices (from our enemies). First, some organismal traits are of specific interest to humans, such as the size of hunted/harvested animals, the concentration of useful plant chemicals, the nutrient content of agricultural products or the resistance of weeds/pests/pathogens to control measures. Second, humans can derive costs or benefits from evolutionary effects on the population dynamics of focal organisms, such as the biomass of harvested or cultivated species, the abundance of weeds/pests/pathogens, and the density and spread of undesirable invasive species. Third, evolutionary effects on communities can interact with our desire to preserve biodiversity (Carroll et al., 2014, Hendry et al., 2010).  Fourth, evolutionary changes can influence emergent ecosystem properties that humans care about, such as carbon sequestration, water clarity or air quality.

 

The consequences of human-induced evolution for human societies are most obvious when the evolving organisms provide direct benefits as friends (e.g. hunting/harvesting and domestication) or direct costs as enemies (e.g. weeds/pests/ pathogens, invasive species and emerging diseases). A less direct conduit for societal impacts occurs when humans influence the evolution of our ‘neighbours’, which can thereby influence our appreciation of nature or provide a mechanism for emerging enemies or friends. Importantly, all of the contexts for human-induced evolution have the potential to feedback to influence human societies through for example- biodiversity, nutrient cycling and productivity. Stated plainly, all ecosystem services and disservices are shaped by past and future evolution, making them -more properly—EVO system services and disservices (Hendry et al., 2010). We further suggest that societal impacts will be strongly shaped by the nature and strength of feedbacks, such as when humans cause the evolution of organisms in ways that have societal impacts, which then induces humans to further modify the evolution of those organisms. Those feedbacks could be positive (reinforcing), which will tend to destabilize eco-evolutionary systems, or negative (opposing), which will tend to stabilize eco-evolutionary systems (Strauss et al., 2014). An especially clear example of positive feed- back is the race between organisms detrimental to humans and our attempts to control them.

 

Conclusions:

Organism–environment interaction represents a biological phenomenon that integrates ultimate and proximate causation on a global scale. Furthermore, it includes all organisms including plants and non-eukaryotes because all organisms are being affected by human-induced rapid environmental change. A mechanistic approach will be critical to understand why some organisms can cope with change and others cannot. New opportunities are developing to study organism–environment interaction. Improved methods for gene profiling mean it is more efficient and cheaper to sequence transcriptomes in tissues from individuals in different habitats, social conditions, etc.

 

Emerging techniques in proteomics and biochemical aspects (e.g., metabolome) allow additional perspectives on organism–environment interaction downstream of gene expression. Recent investigations on maternal effects (and paternal) reveal highly significant effects on phenotypes of offspring that can be passed on to other generations. Effects of diet and endocrine disrupters on gene methylation patterns ecome pertinent here. There is also a great need for mathematical models to provide a framework at the mechanistic levels underlying organism–environment interaction.

 

In summary, mechanistic functional responses can readily fit into existing frameworks for modeling species interactions and, in the guise of fitness functions, evolutionary dynamics. Furthermore, mechanistic functional responses that incorporate organisms’ interactions with their environment can extend these frameworks to explore environmental influences, including multispecies or adaptive responses to changing environments and the evolution of phenotypic plasticity. For both community and evolutionary models, this approach ties into existing theoretical frameworks such as trait-mediated interactions and the evolution of function-valued traits.

 

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Cited as: Rashmita Datta, Suddhasuchi Das, Shreya Das (2020)Organism and Environment Interactions into The Basic Theory of Community and Evolutionary Ecology. ED. Sarkar A.K. Organisms and Environment. Educreation publishing New Delhi. 5-25

 

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